I am a faculty member in Dept. of Computer Engineering at TOBB University of Economics and Technology. Before that, I was a visiting scholar in Dept. of Computer Science at University of Calgary in the research group of Reda Alhajj. In 2009, I completed my PhD thesis in Dept. of Computer Engineering at METU under the supervision of Faruk Polat.

I am a member of eSNAg.

Research Interests:
Systems Biology, Machine Learning, Bioinformatics, Chemoinformatics, Data mining. 

      Home      
 
         CV         

        Courses      
 
        Contact      
Mehmet Tan
Lake Louise
Publications:

Utku Erdogdu, Mehmet Tan, Reda Alhajj, Faruk Polat, Douglas Demetrick, Jon Rokne. Employing Machine Learning Techniques for Data Enrichment: Increasing the number of samples for effective gene expression data analysis. In Proceedings of IEEE International Conference on Bioinformatics & Biomedicine (BIBM), 2011.

Mehmet Tan, Reda Alhajj, Faruk Polat. Subtree selection in kernels for graph classification. International Journal of Data Mining and Bioinformatics, To appear.

Mehmet Tan, Mohammad AlShalalfa, Reda Alhajj, Faruk Polat.
Influence of Prior Knowledge in Constraint-Based Learning of Gene Regulatory Networks. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 8(1):130-142, 2011.

Mehmet Tan, Faruk Polat, Reda Alhajj. Feature Selection for Graph Kernels. In Proceedings of IEEE International Conference on Bioinformatics & Biomedicine (BIBM), 2010.

Mehmet Tan, Reda Alhajj, Faruk Polat. Automated Large-Scale Control of Gene Regulatory Networks. IEEE Transactions on Systems, Man and Cybernetics, Part B, 40(2):286-297, 2010.

Mehmet Tan, Reda Alhajj, Faruk Polat. Scalable Approach for Effective Control of Gene Regulatory Networks. Artificial Intelligence in Medicine, 48(1):51-59, 2010.

Mehmet Tan, Faruk Polat, Reda Alhajj. Derivation of Transcriptional Regulatory Relationships by Partial Least Squares Regression. In Proceedings of IEEE International Conference on Bioinformatics & Biomedicine (BIBM), 2009.

Mehmet Tan, Reda Alhajj, Faruk Polat. Large-Scale Approximate Intervention Strategies for Probabilistic Boolean Networks as Models of Gene Regulation. In Proceedings of IEEE Eighth International Symposium on Bioinformatics and Bioengineering (BIBE) 2008.

Mehmet Tan, Mohammad AlShalalfa, Reda Alhajj, Faruk Polat. Combining Multiple Types of Biological Data in Constraint-Based Learning of Gene Regulatory Networks. In Proceedings of IEEE Fifth Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), 2008.

Mehmet Tan, Faruk Polat, Reda Alhajj. Feature Reduction for Gene Regulatory Network Control. In Proceedings of IEEE Seventh International Symposium on Bioinformatics and Bioengineering, pages 1260 -- 1264 (BIBE), 2007.

F. Polat, A. Cosar, S. Girgin, M. Tan, E. Cilden, M. Balci, E. Kapusuz, V. Koc, A. Yavas, C. Undeger. Kucuk Olcekli harekatin modellenmesi ve simulasyonu, USMOS'05 I. Ulusal Savunma Uygulamalari Modelleme ve Simulasyon Konferansi, 2005.

Professional:
Editor of the book
(with K. Kianmehr and T. Ozyer) : Recent trends in information reuse and integration, Springer Verlag.
Committee member of ASONAM-2012
Associate Edtior of Network Modeling and Analysis in Health Informatics and Bioinformatics